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Can We Save Saltmarsh Birds as Sea Levels Rise? |
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What does global climate change mean for wildlife populations? For some species, warmer temperatures enable an expansion of range and an increase in numbers. For others, especially endemic species or extreme habitat specialists- those at high latitudes, montane or low lying coastal areas for example, a changing climate and rising sea levels pose large, sometimes insurmountable problems. The precarious natural history of the Saltmarsh Sparrow Recent SBE seminar lecturer Chris Elphick of the University of Connecticut and lead editor of the Sibley Guide to Bird Life and Behavior, studies the Saltmarsh Sparrow (Ammodramus caudacutus), an extreme habitat specialist endemic to the middle/high stratum of saltmarshes on the east coast of the United States. Because these birds nest at the level of high tide, routine nest flooding dominates their biology and at least one in three nests is lost to flooding. To mitigate the threat of tides, the sparrows weave domes of grasses over the nests to contain the eggs but even with these adaptive measures tidal cycles are extremely significant to the reproductive success of the saltmarsh sparrow. Only if the female can fit her nesting cycle (with an average length of 26 days) within the tidal cycle (an average length of 28 days) is there a guarantee of her brood surviving the tides. Predictions of the changing climate invariably include predictions of rising sea levels. Based on brood data and hatchling success rates Elphick and his students have collected and calculated, he estimates that a sea level rise of 28 cm will eliminate all reproductive possibility for the Saltmarsh Sparrow. The International Panel on Climate Change (IPCC) projects that sea level rise will cross the 28 cm threshold between 2040 and 2070. It's clear that human activity threatens the habitat an long-term viability of the species. Won't the marshes just move inland? Work by saltmarsh specialists suggest that while marshes will altogether move inland, the proportion of high marsh area to low marsh area will change, trending to a predominance of low marsh. The Saltmarsh Sparrow relies on the vegetation of the mid to high marsh for nesting. All indications suggest that saving the Saltmarsh Sparrow from extinction will require "hands-on management". The Saltmarsh Sparrow is among thousands of species threatened by climate change. Its enthusiasts claim it as 'the most promiscuous bird in the world' citing its unusual reproductive strategies. They praise its rare song and its non-terrirorial behavior. Despite Elphicks's partiality for the sparrow, he realizes biologists, conservation scientists and policy-makers face tough choices as a changing climate transforms landscapes and habitats. Ultimately, as a predicted 10-30 per cent of species worldwide will face the risk of extinction in the next 100 years, many argue that conservation efforts will need to be prioritized and that the extensive protection effort species like the Saltmarsh Sparrow will require for conservation might be better spent on species with higher likelihoods of surviving. The work of Elphick and others in the field will help inform those decisions in the coming decades, for better or worse for saltmarsh birds.
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Study Abroad Information Session for Science Majors |
Biology and other science students are encouraged to attend the Study Abroad Poster and Information Session for Science Majors, Wednesday, 18 November in 105 DPC. The poster session begins at 3:30 pm.Biology student Yin Chiu will present about her semester in Galway, Ireland. |
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SBE hosts Thanksgiving Food Drive |
The School of Biology and Ecology is collecting non-perishable food items for a food drive through Crossroads Ministries in Old Town. Food donations can be left in the marked box in Murray 100, and Trish Costello and Sue Anderson (also in Murray 100) will be collecting cash donations for the Bangor Homeless Shelter. Donate for a chance to enter into the drawing for a beautiful Thanksgiving centerpiece. Join the School of Biology and Ecology in our holiday effort to help those who are less fortunate. |
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Dr. John Tjepkema Returns to Give Seminar Lecture |
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John Tjepkema, Professor Emeritus of the School of Biology and Ecology in Plant Physiology returns to lecture on an area of interest rather than an area of research. Tjepkema, a two-time Boston-marathoner and a nutrition enthusist, shared "Foods for Health- the old and the new" as the first informational seminar in the 2009 Fall Seminar Series. Books published in the last decade, notably The Okinawa Program (2002) and The Blue Zones (2009), have popularized the research interest in communities of individuals who exceed the average life span and exhibit lower rates of cancer and heart disease. Most of the conclusions generated from the study of the lifestyles and diets of the Seventh day Adventists of Loma Linda, CA, Costa Ricans living on the Nicoyan Peninsula, the Barbagians of Sardinia, among others, come as little or no surprise: plant-based diets, rich in grains and legumes and where animal products plat a small roll, correlate with longer life. Of course, more research leads to more robust and specific conclutions, and the study of human longevity and diet receives ample clincal and popular attention. Recent findings point to nut consumption as a factor that correlates with health as strongly as the standard indicators of body mass index and exercise levels. Tjepkema dedicates his personal website to nutrition and health. In a disclaimer on the site, Tjepkema explains that his scientific approach to nutritional information and research grows out of his experience researching and writing in plant physiology. The information he deisseminates is based on published research and he incourages individuals to draw their own dietary conclusions. As prefaced by Tjepkema in his presentation, the most important section of his seminar focused on new data on the amount of sugar in the U.S. diet and its consequences of weight gain and an increased triglyceride load in the bloodstream. Glucose, one of the simple monosaccharides comprising sucrose, can be used by the brain, used or stored by the muscles as glycogen, or stored by the liver as glycogen. A small amount is stored as fat, depending on the activity level of the individual. The other component of sucrose, fructose, due to its slightly different molecular composition, has an altogether different metabolic fate. Fructose cannot be used immediately when the liver is processing glucose, and as a result, fructose is instead turned into triglycerides -fats- that circulate in the bloodstream. Recent research points to high blood triglyceride concentrations as a risk factor for heart disease. Additionally, the liver works very rapidly to process fructose, which can raise uric acid concentration in the blood. Elevated levels of uric acid may contribute to increased blood pressure and higher rates of kidney disease and gout. These findings are of particular interest as high fructose corn syrup becomes increasingly pervasive in the American diet. |
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Daniel Dennett to give Keynote Lecture |
For the keynote address of the semester-long Celebration of Darwin, Daniel Dennett, Austin B. Fletcher Professor of Philosophy and Co-Director of the Center for Cognitive Studies at Tufts University, will present "Darwin's 'Strange Inversion of Reasoning'" in Hauck Auditorium, on 13 October 2009.
Photo taken in Tahiti in 1984 by Hayford Peirce of Bangor, Maine. |
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Darwin Lecture Series Schedule |
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Join us in celebrating Darwin's life and his monumental contibution to biology. These lectures explore the theory of natural selection as bedrock for biological sciences and its influence on evolutionary thought in the humanities and social sciences. The lectures are free and can be heard Monday (m) and Wednesday (w) mornings from 8:35 through 9:50 in 130 Little Hall. Historical Context Darwin, the Reluctant Revolutionary? Historical and Cultural Impact Darwinism, Religion, and Social Darwinism in the 19th Century Natural Selection Sexual Selection The Laws of Variation and the Genome The Genome: Changing Slow, Changing Fast Speciation and Cladogenesis Prokaryotic to Eukaryotic Evolution Evolution of Nervous Systems Evolution of Biological Clocks Historical Perspectives of Development Struggle for Existence, Brain Stem Structure, Human/Fetal Interaction Evolution of Human Response to disease, vaccines Hominid Evolution, Human Migrations, and Ancient DNA Struggle for Existence, Biocultural Evolution Evolution of Warfare Biocultural Evolution, Group Selection Evolution of Facial Expressions Basic Emotions in Infancy Overview of Darwin's Contributions to the Science of Evolution |
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Celebration of Darwin's Life and Work Begins at UMaine |
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The University of Maine begins its semester-long celebration of the life and work of Charles Darwin with the first in a series of twenty-four lectures. Psychology professor Larry Smith opened up the series with a lecture on the historical context of Darwin's publication of On the Origin of Species by Means of Natural Selection in 1859, 150 years ago this year. Slated for Monday and Wednesday mornings from 8:35 to 9:50 in 130 Little Hall, the lectures comprise a portion of INT-289, an interdisciplinary course that explores the influence of Darwin's ideas within the field of biology and beyond. All of the lectures are free and the public is encouraged to attend. On October 15 2009 the College of Arts and Sciences hosts Darwin scholar, philosopher and co-director of the Center for Cognitive Studies at Tufts University, Daniel Dennett for a keynote lecture. This event is sponsored by the College of Arts and Sciences. Fogler Library will host Darwin-related displays throughout the semester, and the celebration of Darwin's 200th birthday and the 150th anniversary of his seminal text will culminate week of Novemver 9-12 with a spotlight evolutionary research at UMaine, a panel on social Darwinism and discussions on Darwin and the Arts. |
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Department To Offer Two New Concentrations |
The School of Biology and Ecology introduces two new concentrations within the department. Students pursuing a BS in Biology or Zoology may elect to concentrate in Pre-Medical Studies, and students pursuing either a BS or a BA in Biology or Zoology may concentrate in Ecology. Either concentration will be recorded on the student's transcript to provide formal recognition of their focused coursework. The concentration in Pre-Medical Studies offers guidance to students preparing for a career in medicine or in any other health profession. In addition to requiring the affiliated science and mathematics courses required for the BS degree, the concentration requires coursework in psychology, analytical and persuasive writing, and biomedical ethics. The concentration in Ecology is intended for students interested in a focus on ecological prinicples within the rigorous curriculum of the biological sciences. In addition to the requirements for the BA or BS degree, the Ecology concentration requires Statistical Ecology and a course in environmental influences. A total of 32 credits is required for recognition of an Ecology concentration.
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Dr. David Foster gives the 2009 Geddes W. Simpson Distinguished Lecture |
The Geddes W. Simpson Distinguished Lecture Series, named in 2001 to honor Geddes W. Simpson, offers lectures that focus on the intersection of science and history. Dr. David R. Foster, Director of the Harvard University Forest, gave the eighth annual address on Maine Day 2009. His talk, titled “Reading and Conserving New England Using History to Interpret and Manage Nature”, serves also as an apt description of his management philosophies wherein ecological history plays a central role. Foster’s management paradigm holds that understanding the past processes that shaped the current ecology of the forest is a powerful tool that can be applied to present and future management strategies. Foster earned a Ph.D. in ecology from the University of Minnesota and is the author of Thoreau's Country--Journey Through a Transformed Landscape, New England Forests Through Time, Forests in Time--The Environmental Consequences of 1000 Years of Change in New England, and Wildland and Woodlands: A Vision for the Forests of Massachusetts. He directs the graduate program in forest biology at Harvard and serves as the Principal Investigator for the Harvard Forest Long Term Ecological Program.
According to Foster, New England’s present-day young forests are an example of the constant dynamism of ecology. As the forests are growing up where old farms once stood, wildlife, notably moose, respond to the changes, more carbon is stored, and forest scientists are able to manage the land in different ways. Under Foster’s direction, history guides the ecological management strategies of the Harvard Forest Research Program but many of the current challenges are unprecedented. Rapid change in climate, the introduction of exotic and invasive species and increased nitrogen presence in soils pressure the forests in novel ways. Natural history, like any other single source of information, will not offer complete answers to management questions, but a healthy dose of ecological thought will certainly aid Dr. Foster and his colleagues in managing the tremendous resource of New England's forests. Dr. Geddes W. Simpson was a member of the University of Maine for fifty-five years. During his tenure he chaired the Department of Entomology and served as an editor for the Maine Agricultural Experiment Station. He retired in 1974. |
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Spring Seminar Series Concludes with Exciting UV Research |
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To conclude the Spring 2009 Seminar Series, Jasmine Saros hosted colleague Dr. Craig Williamson, Ohio Eminent Scholar of Ecosystem Ecology at Miami University of Ohio. Dr. Williamson presented recent research on biotic response to ultraviolet radiation, focusing on two particularly exciting findings. Dr. Williamson’s extensive UV research channels broad questions about the change in structure of trophic relationships in pelagic communities through zooplankton and fish communities. The media frenzy about the growing ozone hole focused popular attention on UV in the ‘80s and ‘90s. The Montreal Protocol (1987) successfully prevented dangerously high UV conditions, and with the popular impression that the crisis has been averted, attention shifted, again, away from ozone and UV science altogether. Dr. Williamson’s research reminds that UV is a “potent force”, regardless of any ozone depletion issues: “The sky is not falling in, but there are some things we should keep an eye on”. The link between climate change and invasive species is commonly recognized. With fish populations, a key to successful invasion lies in spawning depth: if the lake is much colder than optimal, invading fish populations may be restricted to the shallow, warmer regions of the water where light penetrates best. Clearer lakes allow for deeper spawning, but also higher UV levels at greater depths. UV radiation causes irreparable DNA damage that kills fish larvae. Dr. Williamson studied bluegill and largemouth bass, both invasive fish populations in Lake Tahoe. Highly transparent lakes like Tahoe offer “no invasion window” because the UV penetrates deep into the lake, and warm water invading fish can’t spawn at lower depths because of the temperature drop. Dr. Williamson’s research presents the first evidence that UV could play a role in invasion ecology: clearer water may prevent the invasion of new fish. The Chilean altiplano, the plateau atop the Andes Mountains, is the site of the harshest UV conditions on earth. Lakes in the altiplano are shallow and greatly exposed to the UV conditions without the canopy of trees and other organic matter. According to the conventional paradigm, zooplankton avoid predation by fish, dropping lower in the water column by day, and approaching the surface at night. In less transparent waters, zooplankton should thrive, unaffected by UV, but in transparent waters where UV penetrates better, zooplankton should not fare as well. Dr. Williamson investigated how zooplankton in the lakes of the Chilean altiplano survive the UV. His results were surprising; the zooplankton demonstrated an attraction to the UV radiation instead of a propensity for avoidance. This is the first evidence of organisms demonstrating attraction to UV radiation. |
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Schoodic Experience 2009 |
The School of Biology and Ecology welcomes incoming first-year students with an off-campus orientation at the Schoodic Education and Research Center in Acadia National Park on Mount Desert Island. The Schoodic Experience introduces incoming students to the SBE faculty and program in a relaxed and casual atmosphere on Maine’s beautiful coast. While at Schoodic, students participate in faculty-led field activities, explore Schoodic’s facilities and enjoy Mount Desert Island, all while meeting and getting to know other students in the school. More information about facilities, previous trips, and this year’s itinerary can be found here. Registration for the Schoodic Experience ended June 5, 2009. All costs associated with the trip are covered by the fee for NFA 117, a course which all SBE students are required to take in the fall of their first year. For further information about registration, please contact the School of Biology and Ecology at 207.581.2540. |
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Professor Emeritus George Jacobson delivers keynote address at School of Biology and Ecology Celebration |
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His address, titled "Ecological Dynamics in a Changing World: Insights from a Career in Paleoecology", offers highlights from Dr. Jacobson’s noteworthy career, mostly spotlighting his recent work on Maine’s Climate Future: An Initial Assessment, published in April. The publication represents the work of seventy-five Maine scientists in response to a request from Governor John Baldacci for an interdisciplinary, Maine-specific climate assessment and a preliminary framework for meeting the challenges a changing climate will pose in the coming century. Dr. Jacobson edited and contributed to the report which includes within its scope impacts of climate change on the Gulf of Maine, freshwater ecosystems, forestry, biodiversity and indigenous populations as well as concerns and opportunities within agriculture and forest products, tourism and recreation, transportation and energy, and human health and economics. The state of Maine, though moderate in size, boasts a steep climate gradient from the mild southern region tempered by the coast to Aroostook county in the north which experiences some of the harshest winters in the country. In three degrees of latitude, Maine encompasses the climate gradient experienced in twenty latitudinal degrees in Europe, a distance twice the length of California. While this breadth creates rich variety and biodiversity across the state, it of course complicates climate assessment and action, necessitating a Maine-specific focus. Though Maine's Climate Future focuses on the warming observed in the past century, as a paleoecologist, Dr. Jacobson studies the dynamism of millenia, not decades or centuries. Any community, viewed over millennia, differs drastically over time he reminded his audience of biologists and other scientists: “The particular arrangements we study and map are certainly transient”. That all communities constantly reconfigure themselves in the face of perturbation leads to the conclusion landscapes are ever transforming and that that no particular arrangement has any intrinsic importance. Of course, the wealth and diversity of natural resources and systems of Maine are socioeconomically and characteristically integral to the state as they are. Changes in populations and landscape and weather patterns affect each other and threaten to undermine the established way of life that we enjoy and on which we rely. Dr. Jacobson outlined four challenges in establishing a climate policy: an interglacial climate period, continued fragmentation of landscape, a huge and ever-growing human population, and an unprecedented climate both physically and chemically. In dealing with these challenges, Dr. Jacobson encourages an approach that applies what we’ve learned about climate to anticipate future changes; like the Maine’s Climate Future publication, Dr. Jacobson’s address articulates the challenges but only hints at solutions. This is unsatisfying, but fitting. His conclusion resonates with Dean Ashworth’s opening remarks: “Research in the life sciences has never been more important. We [SBE] have a bright future for the next hundred years as well.”
Maine's Climate Future: An Initial Assessment is available for download here. |
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School of Biology and Ecology 2009 Celebration |
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The School of Biology and Ecology celebrated its notable history and its exciting future with an open house event on 17 April, 2009. Tours of the facilities ran throughout the day with posters and laboratory exhibits on display in Murray Hall. In the afternoon, Dr. Ellie Groden, the director of the School of Biology and Ecology and Associate Professor of Entomology, offered a welcoming address and spoke briefly about the School of Biology and Ecology's long tradition of excellence. Dr. Susan Hunter, Associate Provost for Undergraduate Education, praised the role SBE has played in the University of Maine. “Teaching, research and public service comprise the three elements of the land grant mission. I think the School of Biology and Ecology is a microcosm of the University meeting that mission” Hunter remarked.
“We are in very challenging times from a fiscal standpoint…but there are also many reasons to celebrate the accomplishments of the University", Hunter said. "SBE demonstrates commitment to the University’s mission while innovating solutions to current challenges, and in the midst of those challenges, forward-looking and flexible entities will thrive.” Hunter then introduced Dr. George Jacobson for his Keynote Address.
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Dr. Celia Chen Lectures on Mercury Research |
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Mercury, due to its toxicity and bioaccumulation in the food web, is of great concern to biologists. Dr. Celia Chen of Dartmouth College studies the transfer of metals from lake water to fish and the impact of food web structure and trophic status on movement. Dr. Chen visited through the School of Biology and Ecology Seminar Series for a discussion of her most recent work in ecotoxicology. Methylmercury, [CH3Hg]+ is a neurotoxin to humans that causes irreversible brain and kidney damage particularly because it permeates placental membrane and can pass the blood-brain barrier. Dr. Chen cites that humans retain 95% of ingested methylmercury, and as bioaccumulation suggests, many other species are implicated in its absorption and biomagnification, and likewise susceptible to its effects. Recent work has shown that methylmercury is increasingly impacting terrestrial avian species, notably the salt marsh sparrow in addition to the well-studied aquatic populations of piscivorous and insectivorous fish and loons. Most mercury in the ecosystem originates from power plants; coal-fired power plants account for one half of the current atmospheric mercury. Once emitted into the atmosphere, mercury is deposited on the landscape. Its aquatic lifespan is best studied: it moves upwards from algae to crustaceans to planktivorous fish eventually to the highest trophic levels where it can be found in loon tissues in concentrations as much as five times greater than seen in phytoplankton. Especially important in understanding the ecological role mercury plays is understanding its speciation. The fate of Hg2+ differs from the fate of methylmercury. Because of its charge, the former binds to the surface of algal cells whereas methylmercury is found in the cytoplasm. A question of interest in Dr. Chen’s work is the observed disparity between mercury concentrations in sediment and in animal tissue from the same site. Sediment samples from Portsmouth, NH display mercury concentrations two orders of magnitude greater than sediment samples from Wells, ME, whereas tissue samples from organisms in Portsmouth only exceed concentrations from Wells tissue samples by two or four times. This suggests that the relationship between sediment concentrations and tissue concentrations is more complex than initially assumed. Dr. Chen is beginning to expand from her limnological work to address marine systems, particularly examining the impact of the trophic nekton relay where transient species in the intertidal zone feed on resident species before moving offshore. This relay is responsible for cycling carbon and energy offshore; Dr. Chen is curious if this pattern holds for contaminants. Dr. Chen’s primary work, however, is in freshwater lakes. She and other ecotoxicologists have identified ‘mercury hotspots’ in New York and New England where the biotic concentrations exceed the concentrations acceptable for human and ecological health. They evaluated each hotspot against criteria including reservoir fluctuation, local emissions and landscape dynamics to determine what characteristics increase a lake’s susceptibility to high mercury levels. Establishing even a preliminary profile for lakes at risk for high mercury levels will help direct policy and awareness appropriately, and in collaboration with a broader network of mercury monitoring efforts nationwide, Dr. Chen’s work will serve to track changes in management decisions. |
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School of Biology and Ecology Celebration, April 17, 2009 |
The School of Biology and Ecology is celebrating both our shared past and the exciting future with a big event on April 17, 2009. Activities include campus tours, an open house, a keynote presentation by Dr. George Jacobson, a reception, and dinner. This is an opportunity to “Look at Us Now”, meet our current students and faculty, as well as visit with some of our retired faculty. Most of the events are open to all (campus tours and the dinner need preregistration). See full schedule below...SCHEDULE OF EVENTS 11 am - 2 pm: Registration (Murray Hall foyer). Campus maps and event schedules will be available. 11:30 am - 1:30 pm: Tours (Campus, Arboretum, new laboratory facilities – requires preregistration) or Lunch (Union/Bears Den, Wells Commons). 1:30 - 2:45 pm: Open house – 1st floor of Murray Hall (innovative teaching and research displays). 2:45 - 3:00 pm: Welcome and Introduction - Dr. Susan Hunter – Provost, Dr. Edward Ashworth – Dean, College of NSFA, and Dr. Ellie Groden, Director of SBE. 3 - 4:15 pm: Keynote Presentation: Ecological Dynamics in a World of Changing Climate: Perspectives from a Career in Paleoecology -- Presented by Dr. George Jacobson, Maine State Climatologist, Professor Emeritus, School of Biology and Ecology and the Climate Change Institute 4:15 - 5:15 pm: Reception. Please join current faculty, students and others at an informal reception immediately following the Keynote Presentation 5:30 - 7:30 pm: Emeriti and Friends Dinner (Wells Commons). Help us celebrate our shared history and the formation of the new School of Biology and Ecology by enjoying dinner with current and former colleagues and Professors (requires preregistration). 8:00 pm: (For those interested) The American Ballet Theatre at the recently renovated Collins Center for the Arts. Located on the University of Maine campus, the Richard R. and Anne A. Collins Center for the Arts is the cultural centerpiece of eastern and northern Maine. Through ABT II, the American Ballet Theatre brings the stars of the future to the stage. The ABT II is a small classical company of young dancers of outstanding potential. Visit www.collinscenterforthearts.com for more information or call 1-800-622-TIXX to purchase your tickets. For more information about the School of Biology and Ecology Celebration, email inquiries to sbe@umit.maine.edu. |
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Tropical Ecology Students Travel to Brazil |
For more than ten years, Bill Glanz (SBE), Aram Calhoun (Wildlife Ecology) and Mac Hunter (Wildlife Ecology) have teamed up to offer a Tropical Ecology Field Course, INT 475, during the spring semester. The course, which culminates in a two-week trip during spring break, offers twenty-two students the opportunity to experience the tropical ecosystems and wildlife they’ve studied. Though the course attracts mostly biology and wildlife students, it is open to students from any discipline. The course emphasizes opportunities to view rare and endemic wildlife and behold neotropical ecosystems, but centers around conservation biology with implications for the social sciences. Students witnessed firsthand governmental efforts to develop ecotourism in rural Brazil; they were housed for part of their trip in such accommodations. Other opportunities afforded students an exposure to the complex relationship between industry and environment in cattle ranching and mining operations and the commonly noted problems of deforestation and land degradation. Students meet weekly from January through March in preparation for the trip. While traveling students are required to keep a natural history journal chronicling their readings, lessons from the natural history guides, and their observations and impressions. Additionally, students keep a checklist of all of the taxonomic families they see. Students visited the Pantanal, the world’s largest freshwater wetland, in southwestern Brazil. Brazil is home to the capybara, the world’s largest rodent, as well as howler monkeys, both mammalian highlights of the trip. The open water and grassy marshlands of the Pantanal landscape lends itself to birding. Especially notable birds included the jabiru storks (Jabiru mycteria), the great potoo (Nyctibius grandis), and students were lucky enough to see the Hyacinth macaw, (Anodorhynchus hyacinthinus) a target species for birders. Aram Calhoun noted that the trip ‘converted’ several students to birding: “Students say ‘I won’t look at birds the same way again’.” Often, nothing in ecological education parallels field exposure to develop in students a discerning and informed view of the natural world.
Photo courtesy of Marcus Collado. |
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Celebration of Darwin Course Offered |
Two thousand and nine marks an important year in the biological sciences: Charles Darwin’s 200th birthday and the 150th anniversary of the publication of his landmark work, On the Origin of Species. To celebrate his life and work, the university will offer a one time only Darwin-based class (INT 289) this fall. Darwin's theory of natural selection, first espoused in On the Origins of Species, offers the mechanism for evolutionary change that revolutionized biology and is accepted 150 years after its introduction. Kristin Sobolik, trained in biology, recognizes natural selection as biology’s foundational theory. Sobolik is a professor of Anthropology and Climate Change and is organizing the Celebration of Darwin course. The framework she has devised for the course highlights the profound implications of natural selection on the biological sciences, but also on anthropology, psychology, and chemistry. Collaborating with at least twelve other faculty who represent six departments, Sobolik has designed a course with a scope more comprehensive than narrow and an approach more celebratory than academic. Instead of structuring the course around a close, chapter-by-chapter examination of On the Origins of Species, Sobolik has opted to address Darwin’s later works, particularly The Descent of Man and Darwin’s letters in more detail. This method allows for an interdisciplinary exploration of how the theory of natural selection is applied in the personal research of the collaborating faculty. Possible topics of presentation will represent a wide range of ongoing research at the university and include the evolution of warfare, the spread of disease in humans, neurological evolution and facial expression. Students will take two exams covering the material presented in the lectures and write a paper about a topic of their choosing that Darwin addressed in his extensive correspondence. Sobolik intends to open enrollment to up to fifty students but also invite the public to attend the Monday and Wednesday morning lectures. She and other faculty anticipate informal meeting times for further discussion of Darwin's life and the theory of natural selection. For Sobolik, a tribute to Darwin and On the Origins of Species is an exciting prospect to demonstrate where his marvelous work has lead us. "One hundred and fifty years later, this is still the book" says Sobolik. "The book is not the bible, the book is just the origin."
More information about the course speakers and other Celebration of Darwin Events on campus can be found here. |
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Agricultural Landscapes Past and Present: Dr. Greg Zaro Presents in the SBE Seminar |
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Dr. Gregory Zaro of the Antropology Department and the Climate Change Institute terms himself a Historical Ecologist based on his interdisciplinary background and interests. He concerns himself with the co-evolution of humans with their environments, particularly in human-manipulated environments. Agricultural sites provide an insightful area of research for Dr. Zaro as a physical intersection of people and environments. In geographies where paleoecology cannot rely on ice cores and lake basins, agricultural sites can serve as a proxy of environmental changes over time.
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Remembering Professor Randy Alford |
Professor Randy Alford passed away February 9th at the Hospice Ministries facility in Ridgeland, Mississippi. Randy Alford came to the University of Maine as an Assistant Professor of Entomology in 1982, after a one year appointment as a Research Entomologist in the Chemistry Department at the New Brunswick Research and Productivity Council in Fredericton, New Brunswick, Canada. Randy’s research focused on the chemical ecology of insects, originally working on insect attractants and sex pheromone during his PhD and post-doctoral studies. At the University of Maine, he investigated plant chemistry associated with insect feeding stimulation and deterrence, and later in his career, he combined these interests in the development of a push-pull strategy for management of the Colorado potato beetle with his research colleagues, Dr. Dick Dickens and Dr. Andrei Alyokhin, and graduate student, Dr. John Martel. During his 26 year career at the University of Maine, Randy served as Chair of the Department of Entomology from 1992-1994, and with the merger of entomology and plant sciences, Chair of the Applied Ecology & Environmental Sciences Department from 1994-1997. He was also instrumental in establishing the Sustainable Agriculture Program at UMaine in 1986, and developing the long-term potato research program, the Potato Ecosystem Project, in 1992, which has continued to this day. Throughout his career, Randy has inspired and taught many students at both the undergraduate and graduate level, formally in the classroom teaching “Insect Morphology, Physiology & Behavior”, “Pesticides and the Environment”, “Plant-Pest Interactions”, “Insect Ecology”, and Honors Tutorials, and as significantly, informally in the many conversations and discussions he participated in with students and fellow colleagues in his office, hallways and committee meetings. Students revered Randy for his questions and philosophical perspectives on life as they did for his expertise in insect physiology and behavior. Randy served as major advisor for seven graduate students, but also served on many more graduate and honors advisory committees. He also served on the Honors Council for five years, and was a dedicated faculty mentor in the Maine Upward Bound program, which assists qualified students with economically disadvantaged backgrounds to improve their skills in high school and to prepare to enter and succeed in college. But Randy’s first academic love was entomology and he worked from 1997 to 2005 to preserve the legacy of Maine’s most renowned entomologist through the development of the Edith Patch Education Center. Randy was Professor of Entomology in the School of Biology and Ecology at the University of Maine at the time of his departure due to illness. UPDATE: Professor Randy Alford Memorial Service |
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Dr. Lara Hudson Opens 2009 Seminar Series |
Dr. Lara Hudson of Williams College gave a presentation on recent work with small heat shock proteins in the zebrafish (Danio rerio) model system. Dr. Hudson's current research examines the role of small heat shock proteins during developmental stages in neurological and muscular systems, particularly with regard to two human diseases: Charcot-Marie-Tooth disease and Distal Hereditary Motor Neuropathy. Both diseases arise from mutation events in genes that code for small heat shock proteins.
This area of research represents a crucial intersection between environmental and genetic factors. |
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Dr. Remy Rochette Visits Through Seminar Series |
Dr. Remy Rochette, of the University of New Brunswick, Saint John, appeared as part of the SBE Friday Seminar Series on December 5th, 2008. Recently tenured Dr. Rochette studies phenotypic evolution in marine invertebrates and spoke on recent research on the relationship between green crabs, Carcinus maenas, and intertidal snails, Littorina obtustata, in the Gulf of Maine and the Bay of Fundy.Green crabs, introduced to the Gulf of Maine only as recently as the 1950s, have had a marked influence on ecosystem dynamics. The effects of invasive species can be observed from broad changes in landscape to far reaching, but narrower changes on the gene-level. The effects of invasive species have been far reaching in scope and observed on all ecological levels: from the breadth of landscapes, all the way down to the narrowness of genetic expression. Dr. Rochette's research focused on the phenotypic level, and used shell thickness in L. obtustata as an example of physiological modification in the presence of green crab predation. Such changes were not observed in populations of another intertidal snail, Littorina littorea, not generally prey to C. maenas. Dr. Rochette also suggested changes in green crab morphology as evidence of green crab response to L. obtustata, but that both examples of morphological changes were due to phenotypic plasticity in both species, not an evolutionary arms race between the two. |
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University Hosts Prestigious Borlaug Fellow |
Benildo De los Reyes of the School of Biology and Ecology hosted Dr. Tulin of Visayas State University, Philippines in his month-long fellowship.
Dr. Tulin's work with Dr. De los Reyes allowed him to develop some models of regulatory networks in arabidopsis. "What I'm studying here is all about transcription, which is very good for my work. These are the basic concepts of why physiological change happens my crops." Despite the cold November weather, Dr. Tulin was pleased with his visit: "It's my first time here in the U.S. and I'm happy I've landed here." More information about the Borlaug Fellows Program can be found at http://www.fas.usda.gov/ICD/borlaug/program.htm |
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Prof. John Tjepkema retires |
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John Tjepkema, Professor of Plant Physiology, retired at the end of the spring semester, 2008. John came to UMaine from the faculty at Harvard University Forest in Petesham, Mass., 26 years ago. Since then, John has continued his productive research program on the mechanisms of nitrogen fixation in Frankia and actinorhizal plants. He has authored and co-authored numerous publications and book chapters and co-edited a book with his wife and colleague, Dr. Christa Schwintzer. He has served on review panels for the USDA and was Consulting Editor for Plant and Soils for 23 years. Over his tenure at UMaine, John taught Plant Physiology lecture and labs, Plant Physiological Ecology and took a major role in our non-majors' course in biology. He also has been a particularly important resource for our graduate students through his courses and scientific expertise, also as graduate coordinator for Botany and Plant Pathology for a number of years, and then coordinator for the interdisciplinary Plant Science PhD program for 16 years. |
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Prof. John Ringo retires |
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John Ringo, Professor of Zoology in the School of Biology and Ecology, retired at the end of the spring semester, 2008. John came to UMaine from UC Davis 34 years ago. His research with the redoubtable insect model, Drosophila, initially focused on the genetics and evolution of behavior, areas in which he also contributed in teaching. But since the early days John's work has branched out widely to include circadian and ultradian rhythms, fly mating song, endocrine control of mating and cardiac physiology, and most recently, field biology of flies and their resistance to pesticides. As an accomplished statistician, he taught biometry and also has helped his colleagues and graduate students solve numerous numerical conundrums. His expertise earned him stints as Associate Editor of Behavior Genetics and Evolution, and he is currently serving his 26th year on the editorial board of Behavior Genetics. John has recently written a textbook on genetics, and it has already been translated into three foreign languages. |
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Prof. George Jacobson retires |
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George Jacobson, Professor of Botany and Quaternary Studies in the School of Biology and Ecology and the Climate Change Institute, retired at the end of the spring semester, 2008, after 29 years of service to the University. George joined the faculty at UMaine in 1979 after serving as AAAS Congressional Science Fellow and then as a staff member of the U.S. Senate Committee on Environment and Public Works. George's extremely productive research career has been paralleled by his interest and significant contributions to the public policy of science since early in his career. George's research interests focus on paleoecology as a tool for predicting climate change, and his innovative research program lead him to work with colleagues here on campus as well as around the globe from Scandinavia to New Zealand to South America. He has authored numerous publications, given many invited seminars, and trained a number of graduate students. He also served as the Associate Director (1989-1993) and Director (1993-2002) of the Institute for Quaternary Studies—now the Climate Change Institute, and currently serves as the Associate Director of the School of Biology and Ecology. George's commitment to our institution is truly legendary as is his willingness to participate in the public and political discourse within the state on climate change and other issues of science and research policy. The University community is eternally grateful for the role he played as a member of the "Faculty Five." These distinguished university faculty traveled the state persistantly to successfully translate the importance of Research and Development funding both to the University and to the State's economy. George is also an avid sports fan and has contributed to our Athletic programs in numerous ways (serving on search committees for coaches and athletic directors, athletic advisory committees, America East Conference committees, and as our faculty rep to the NCAA). But we know that George's favorite sports adventures have been his own on the golf course. As a core member of the "Dream Team" from NSFA, he has represented us well from Orono to Sugarloaf to Hilton Head and Florida. |
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Ancestral Alewives |
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A genetic study of alewives living in landlocked lakes in Connecticut found that the popular baitfish evolved from a common anadromous rather than a freshwater ancestor. The research found no evidence to uphold a common belief that all Connecticut landlocked alewife populations are nonnative, the result of intentional stocking years ago to provide forage for game fish. The landlocked populations examined diverged from a common anadromous ancestor between 300 and 5,000 years ago, according to Eric Palkovacs, a postdoctoral researcher in the University of Maine School of Biology and Ecology, and his colleagues at Yale University. This time frame overlaps with the onset of human dam construction in Connecticut. The study of genetic and phenotypic divergence between anadromous and landlocked alewife populations was conducted as part of Palkovacs' dissertation at Yale. It was published in a recent issue of Molecular Ecology. Like other anadromous fish such as Atlantic salmon and sturgeon, alewives make annual runs up freshwater streams to spawn, then return to the sea. They can be found in the coastal waters from Labrador to North Carolina. But landlocked alewives have lost the marine phase of their life cycle. The researchers found that foraging traits have evolved in the landlocked populations in Connecticut to allow them to survive by eating smaller zooplankton. |
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Research on Sturgeon in the Penobscot River |
Murray Carpenter from MPBN recently joined our research crew to discover what we have been learning about sturgeon in the Penobscot River over the past year and a half. In January 2006 NOAA-Fisheries approached Dr. Michael Kinnison to discover if he would design a study to determine whether sturgeon were present in the Penobscot River. Dr. Kinnison, in the School of Biological Sciences, decided to work with Dr. Gayle Zydlewski, in the School of Marine Sciences, to devise a study plan. NOAA-Fisheries and USGS funded the project. Stephen Fernandes was brought on as a M.S. graduate student in Environmental and Ecological Sciences program. Phillip Dionne started working on the project in September 2007 as part of the dual MS degree in Marine Biology and Marine Policy he is pursuing in the School of Marine Sciences. Since spring 2006 155 shortnose sturgeon (listed as endangered under the Endangered Species Act) 36 Atlantic sturgeon have been captured. All have been externally and internally tagged for later identification to estimate population size. A subset of these individuals have been tagged with ultrasonic tags, used to determine specific migratory patterns in the river. One interesting behavioral pattern that we have documented is the movement of individuals (both shortnose and Atlantic) between the Penobscot River and the Kennebec River. Future research, made possible by funding from NOAA-Fisheries, the Maine Department of Marine Resources, and The Nature Conservancy, will allow us to refine population estimates for the Penobscot River and determine whether or not spawning is occurring in the Penobscot. Our results have been instructive to both the Penobscot River Restoration Project and the Cianbro, LLC project in Brewer. |
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One man, one life, one fungus |
By Kathryn Skelton , Staff Writer "Some of their enzyme are used to produce that stone-washed jeans look," said Seanna Annis, who studies plant fungi at the University of Maine. "Soy sauce has actually got a fungus involved in fermenting the soy beans; that's what actually helps to give it that flavor." One man, one life of fungi |
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UMaine Study Indicates Humans Accelerate Trait Change in Animals |
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September 26, 2007 ORONO, Maine – The influences humans have on the habitats of other species have long been recognized, raising concerns about loss of species. However, another widespread outcome of such disturbance has come to light. After examining over 3000 estimates of rates of evolution in wild animal populations, all occurring in modern times, UMaine researcher Michael Kinnison and colleagues from McGill University in Quebec have found that humans are accelerating changes in the animals themselves. |
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Preparing for the Energy Crunch by UMaine Professor John Tjepkema |
Oil is essential to the United States and world economies because it is the primary source of energy for transportation via auto, truck, and airplanes. In Maine it is also widely used for home heating. Thus any limitations in supply and-or major increases in price could have major effects on Maine and U.S. citizens. When the price of oil reached high levels two years ago, many thought that it would soon decline as new oil wells began production. However, world oil supply has not increased very much, and prices have remained high. The question now facing the world is whether oil production is approaching a peak, where oil production from new wells is no longer sufficient to replace declining production from older wells. If we are approaching a peak, this could have a severe impact on the world and Maine economies. The International Energy Agency advises its 26 member nations, who are mostly oil importers, on energy policy. In the past the IEA has been relatively optimistic in its prediction of future world oil supplies. However a recent five-year forecast by the IEA predicts an increasingly tight oil market, with decreasing OPEC spare capacity. This could mean much higher prices and major shortages of oil in the event of hurricanes, wars, etc. Fatih Birol, the chief economist of the IEA, stated in a June interview that oil production by non-OPEC producers will peak in the next five or 10 years. Thus any major increases in world oil supply will need to come from OPEC. According to the IEA forecast, half of the increase in OPEC production over the next five years will be from Saudi Arabia. However some believe Saudi Arabia may be having difficulties in maintaining even its current levels of production. Matthew Simmons, an oil investment banker and a member of the National Petroleum Council, concludes that it is unlikely that there will be any large new oil fields discovered in Saudi Arabia, and that production is only being maintained "by using advanced drilling and completion technologies in the mature giant fields." Details are given in his 2005 book, "Twilight in the Desert — The Coming Oil Shock and the World Economy." After producing at a constant rate of 9.5 million barrels of oil per day from June 2004 until February 2006, Saudi production has decreased, with a rate of only 8.6 million barrels per day in June 2007. Matt Simmons suggests that in fact the 9.5 million barrels per day may represent the peak of Saudi oil production. The Saudis maintain that they have reduced production voluntarily, because of a surplus of oil on the market. However, during the past two years drilling activity has increased sharply in Saudi Arabia. Only time will tell whether this drilling results in increased capacity (12.6 billion barrels per day in the five-year IEA forecast), or represents a struggle to maintain current Saudi output. If the latter is true, world oil supply will be even tighter than is predicted by the IEA. The trend in the rate of Saudi oil production over the coming months and years will be critical in determining world oil supply and price. If the Saudis do not markedly increase production there may not be sufficient oil to supply the demand, and oil may become much more expensive. To prevent a possible crisis we should pay attention to Matt Simmons. Simmons suggests that an "energy war footing" is needed, with a Manhattan-type project for energy R&D, and a major reduction in both long-distance commuting and shipment of goods. To the credit of both the federal and Maine state governments, many actions are being taken to reduce our oil demand. However much more needs to be done, and soon. Otherwise the cost of oil and gas may consume an ever-increasing fraction of household income. As things stand, the price of gas could rise much more rapidly than any increase in average mileage of the cars being driven. Rapid increases in oil heating bills could make it difficult for many to meet their home mortgage payments. Fortunately there are many options for reducing oil demand. Increased efficiency of use is one approach. For example, auto excise taxes could be based in part on fuel efficiency rather than the sales price of a vehicle. Greater publicity could be given to tax incentives for energy efficiency in home construction and remodeling. A top priority in Maine should be to take advantage of our abundant wood resource to make a rapid transition away from oil heat. One possibility is wood pellets. In Austria it is estimated that two-thirds of new homes have wood-pellet furnaces. The use of wood for energy will also stimulate the state economy by keeping the dollars spent on home heating within the state, rather than sending them abroad for imported oil. John Tjepkema is a professor of plant physiology at the University of Maine.
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Electron Microscopy and Imaging Facilities Serve the Tripartite Mission of the University, Supporting Research, Education, and Service |
The Electron Microscopy Facility, which the School of Biology and Ecology has operated for 40 years, is a major resource for the entire campus, used by over 17 departments. It houses and maintains two transmission electron microscopes, a scanning electron microscope, and a laser scanning con-focal microscope. |
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Example of Integration of Ecology and Pathology Focused on Blueberries |
Frank Drummond and Seanna Annis along with John Smagula in Horticultural Services, Dave Yarborough in Cooperative Extension, Andrew Files in the Department of Resource Economics and Policy have been developing an integrated management plan for organic production of lowbush blueberries for Maine growers in an Organic transitions grant from USDA-CREES. Field studies over multiple crop cycles have shown that changes in one production practice or ecological interaction in the lowbush blueberry ecosystem can result in numerous changes on the health of the plants, and their pests and pathogens. Increased available nitrogen levels in lowbush blueberry fields can produce decreases in yield due to increases in weed pressure and the incidence of the fungal disease, mummy berry blight. Insect pests damage and decrease the quality of lowbush blueberry fruit but also provide wounds for pathogens to enter plants and act as vectors for transferring disease inoculum between plants. Integrative research is necessary to develop organic management techniques as well as to sustain conventionally grown crops. The faculty also provides support to conventional growers to decrease off-farm inputs and maintain a sustainable production system.
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Paleoecological Tools to Assess Long-Term Environmental Change |
Paleoecological studies expand the time scale over which ecological patterns and processes are investigated. Lake sediments serve as a repository for fossils that can be used to investigate environmental change over time scales ranging from hundreds to thousands of years. Jasmine Saros (Bio Sci and the Climate Change Institute) uses diatom fossils from the sediments of lakes to reconstruct trends in pH, nutrient loading, and climate change. She has received funding from the National Science Foundation to investigate the effects of enhanced atmospheric nitrogen deposition and climate change on working with the National Park Service alpine lake ecosystems. She recently began to assess critical nitrogen loads to aquatic ecosystems using paleoecological records. Current paleoecological research in Biological Sciences and Climate Change includes other studies of past aquatic and terrestrial environments. George Jacobson and Ann Dieffenbacher-Krall have recently completed a major NSF-funded study of the past 60,000 years of vegetation and climate in central Florida, and work in the lab now includes studies of paleoclimate in New Zealand and South America.
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Building Innovative Educational Tools for Enhancing Education and Assessing Learning Outcomes |
The School of Biology and Ecology has built a major multimedia center, the Bio New Media Laboratory, which creates sophisticated Web applications for both large and small courses. The facility works with a core faculty (Seth Tyler, Seanna Annis, Len Kass, Farahad Dastoor, and Mary Tyler of SBE), and together they have created a major on-line course management system, called Synapse, now in use in our large introductory courses and a number of upper-level courses (BIO 100, BIO 200, BIO 208, BIO 222, BIO 336, BIO 353, BIO 377/378, BIO 450, SMS 201), with additional courses outside of the department considering adoption. In addition to advancing education through multimedia, student interaction, and increasing ease of teaching courses with large enrollments, the platform is used to collect and analyze data for assessing learning outcomes. The facility was started by Mary Tyler, who has been developing multimedia educational material for developmental biology, cell biology, genetics, and behavior courses for a number of years. Her 9,000 grant from NSF-DUE enabled her to build and publish interactive CD-ROM-Web hybrids as well as DVDs and electronic lab manuals, as well as to develop the expertise in the lab through Ron Kozlowski, now Director of the Biology New Media Facility. In collaborations with other faculty, the facility has been advancing programs in education and serving research, for example: Michael Kinnison (SBE) on projects in ecology, Sara Lindsay (SMS) on a K-12 education project, Mary Rumpho (BMMB) on an educational project on evolution and gene transfer from plants to animals. Seth Tyler (SBE) on projects in data-base management and the evolution of lower metazoa, Chris Campbell (SBE) on a project to develop a Web database for the University of Maine’s and Josselyn Botanical Society’s Herbaria on plants and fungi, and with NSFA on developing a dynamic Web site for the College.
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International Field Courses in Tropical Ecology |
A key element in any curriculum in biology and ecology is first-hand experience in the field. This can be achieved through lab or work-experience, directed research, or other routes. Many of our biology students directly experience tropical ecosystems through a travel study course taught each March Break, INT 475: Field Studies in Ecology. Bill Glanz (SBE) has co-taught this course every year since 1998, with Mac Hunter (Wildlife Ecology) and Aram Calhoun (Plant, Soil & Environmental Science). The 2007 course to Panama will be the fourth visit to Central America; the course also has traveled to Peru three times and South Africa three times. In each course, 18 to 23 University of Maine students study examples of local ecosystems, be they tropical rainforests, mountain cloud forests, tropical savannas, or grasslands, and learn about key plant and animal species in each. Equally important, they review the human ecology of each region, focusing on land uses that are altering or degrading the natural landscapes of these tropical countries. Most students find this experience a valuable complement to their exposure to Maine’s ecosystems in our curriculum, and many are stimulated to consider graduate research or work experience in tropical countries.
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Undergraduate Education for the Health Professions |
Biology is the most popular major nationwide for students preparing for graduate study in the Health Professions, and the degrees in Biology and Zoology at UMaine includes all prerequisites for premedical, predental, preveterinary and other health-centered programs. In the School of Biology and Ecology, a majority of undergraduate students are interested in pursuing careers in the health professions, and a large percentage of them go on in health fields, including allopathic and osteopathic medicine, physicians assistants, physical therapy, veterinary medicine, chiropractic medicine, dentistry, pharmacy, optometry and ophthalmology. Our Biology and Zoology curriculum includes a number of health professions courses, which prepare the students for further study in these health fields by taking our courses such as BIO 100 Basic Biology, BIO 200 Biology of Organisms, BIO 208 Anatomy and Physiology, BIO 307 Introduction to neuroscience, BIO 325 Principles of Biotechnology, BIO 329 Vertebrate Biology, BIO 336 Developmental Biology, BIO 438 Morphogenesis and Differentiation, BIO 377 Animal Physiology, BIO 441 Biological Ultrastructure, BIOI 450 Histology, BIO 462 Genetics, BIO 474 Neurobiology, BIO 479 Endocrinology, BIO 480 Cell Biology, and various advanced courses in Genetics, Physiology, and Electron Microscopy.Our degree in Clinical Laboratory Sciences with specializations in Medical Technology and Cytotechnology, qualify students for careers in hospitals and other medical facilities. Students spend their senior year in a practicum in a hospital, arranged through this program. A specialized curriculum includes biology courses such as, BIO 405 Clinical Lab Methods of Infectious Disease, BIO 421 Introduction to Clinical Laboratory Methods, and specialized courses taught as part of the practicum at Eastern Maine Medical Center (BIO 422 Clinical Hematology, BIO 423 Clinical Microbiology, BIO 424 Clinical Immunohematology, BIO 425 Clinical Chemistry, and BIO 426 Clinical Microscopy). The Accelerated Binary Degree Programs—3+4 fast track to Osteopathic Medicine and 3+4 Agreement with Logan College of Chiropractic established by the University of Maine with the University of New England College of Osteopathic Medicine (UNECOM) and the Logan College of Chiropractic, provide an accelerated undergraduate curriculum leading a BS in Biology and a medical degree. Students in Biology can fulfill their undergraduate requirements at UMaine before entering the graduate programs at UNECOM and Logan College of Chiropractic. |
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Effects of Soil Amendments on Potato Pests |
Development of sustainable agricultural technologies is impossible without regarding cultivated fields as agricultural ecosystems—this integrative approach must be taken rather than thinking of agriculture as conglomerations of plants, insects, soils, and manufactured inputs. One of the foundations of organic farming is the assumption that the organic production systems create a generally unfavorable environment for pest populations. Entomologists and plant pathologists in the School of Biology and Ecology are investigating how soil properties and resulting potato plant health influence susceptibility to disease and insect pests. Collaborative research efforts involving entomologists Andrei Alyokhin, Frank Drummond, and Ellie Groden (SBE) and agronomist Greg Porter from the Department of Plant, Soil, and Environmental Sciences have shown a consistent reduction in the densities of Colorado potato beetle larvae and summer-generation adults on potatoes grown in manure-amended soils. The negative effects were broad in scope, including lower fecundity, higher mortality, slower development, and lower foliage consumption on manure-amended plots. Currently, Andrei Alyokhin is teaming up with molecular geneticist Benildo de los Reyes (SBE) to elucidate the mechanisms causing these phenomena. Stellos Tavantzis (SBE) and Robert Larkin from the USDA-ARS New England Plant, Soil and Water Laboratory have been studying the effectiveness of biological control organisms and compost amendments in managing soil-borne diseases of potato and improving crop yields in sustainable and organic production systems. Tavantzis has been working on the molecular and biochemical dissection of the phenomena of plant growth enhancement, genetically regulated attenuation, and compost-induced attenuation of virulence in the fungus causing Rhizoctonia disease of potato. This knowledge is being used to design novel, sustainable strategies for managing plant diseases and reducing the use of environment-polluting fungicides.
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Aquatic Ecology – Stream Communities and Managing Maine’s Lake Ecosystems |
Maine has more lakes, miles of rivers and acres of wetlands than all of the remaining New England states combined. This wealth of aquatic resources has provided ecosystem services to Maine residents since prehistory, currently represents a cornerstone of the State’s economy, and figures heavily into aspects of future sustainable development. Expertise in aquatic ecology has grown dramatically at the University of Maine in the last five years, uniquely positioning the University to become a regional leader in aquatic research and education. For example, Kevin Simon’s research focuses on how the links between biological communities and biogeochemistry in streams are altered by human actions such as invasive species, agricultural landuse, and acid deposition. This research integrates techniques ranging from molecular biology to quantify microbial community structure to whole-stream additions of stable isotope tracers to track the cycling of energy and nutrients in streams. Looking toward the future, a team of aquatic ecologists is currently developing approaches for a landmark study in aquatic restoration based on planned dam removals on the Penobscot River. Many of these research goals have been, and will continue to be, met through external collaborations and campus interactions with entities like the Senator George Mitchell Center, the Climate Change Institute, the Department of Wildlife Ecology, the Department of Resource Economics and Policy, USGS, USDA-NRI, and Maine Agricultural and Forest Experiment Station.
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Using Physiology to Link Bird Ecology and Behavior in Basic and Conservation Research |
Birds can be sentinels for environmental change. Rebecca Holberton’s work, funded by the National Science Foundation, Maine Agricultural and Forestry Experimental Station, and Maine’s Outdoor Heritage Fund, integrates behavior, physiology, and ecology to understand how wild birds cope with environmental conditions. Basic and applied research questions aim to unravel how birds meet challenges to their energy demand. While Holberton’s work focuses on the interaction between environmental factors (e.g., weather, food availability and habitat quality) and physiological constraints during the migratory period, she is interested in learning how success during each stage of the annual cycle can be influenced by activities during the other stages. The work has spanned from the polar regions to the tropics and includes a wide array of bird species such as songbirds, seabirds, and shorebirds in collaborations with the Smithsonian Migratory Bird Center, the U.S. Forest Service, U.S. Fish & Wildlife, and Maine Inland Fisheries & Wildlife. Much of the work has been done at the Penobscot Experimental Forest in Bradley, Maine. Broad scale bird movements are also monitored by portable surveillance radar to understand how migrants respond to the rapidly changing landscape (via cell towers, wind turbines, habitat loss) of the Gulf of Maine region.
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The Molecules of Muscle Differentiation |
The primary source for power that drives animal locomotion is muscle. Each step of muscle formation during early development translates to a progressive refinement of functional physiology. Clarissa Henry, of the Department of Biological sciences, utilizes the zebrafish as a model system for skeletal muscle development and function. She uses UMaine’s Zebrafish Facility as well as the Electron/Confocal Microscopy Facility to ferret out the molecular and morphogenetic networks that underlie muscle differentiation. She has recently begun to extend her work to other fish, such as Icefish from Antarctica. Because a large variety of diseases, such as the muscular dystrophies, affect muscle tissue in humans, Henry has also been collaborating with Maine institutions that focus on biomedical research such as the Jackson Laboratory and Maine Medical Research Institute. Henry has obtained funding from the Muscular Dystrophy Association and is working with a local MDA representative to increase public understanding of the muscular dystrophies. Thus, this organism-driven research focus allows Henry to integrate to “larger scale” questions (how does skeletal muscle develop in fish that live in frigid waters?) as well as focus on “smaller scale” questions (how do muscle fibers attach to tendons, which is critical to prevent muscular dystrophy?). Her work integrates fields in developmental biology, genetics, physiology, and ecology.
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Systematics as the Basis for Knowing the Organism |
Identifying invasive plants and animals requires exacting criteria for distinguishing them from native species and gauging their potential for harming ecosystems. Worldwide shipping is introducing species into habitats where they have the potential to significantly alter native communities. Particularly problematic is accidental introduction of aquatic species through dumping of ballast water by ships. One such invasion recently identified is that by an acoel flatworm, which has spread into Maine waters from two probable shipping centers, Boston and Halifax, Nova Scotia. Seth Tyler of the School of Biology and Ecology, through support of a 0,000 National Science Foundation grant on systematics of the Acoela, has collaborated with ecologists Brian Rivest and James Coyer at Cornell and Anne Chapman at Dalhousie University to identify the invader as Convoluta convoluta, an acoel native to Europe. It first showed up in the vicinity of the two ports and appears to be spreading into the Gulf of Maine and south into Long Island Sound, typically occurring in such high numbers that, despite its small size (2--3 mm), it attracted the attention of divers by its abundance on kelp and urchin barrens. This worm bears symbiotic algae (zooxanthellae), and Tyler in collaborative work with molecular biologist Adam McCoy at Harvard University identified the symbiont through electron microscopical and molecular markers as the diatom Licmophora, as had been proposed for the European native worm. McCoy has since shown that this diatom is also invasive, and that its free-living form is invading the North American Atlantic coast in waves ahead of the acoel, providing the acoel with the resources to extend its own invasion.
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Invasion Ecology – Links between University Researchers and State and Federal Agencies to Address Priority Needs in Maine |
University of Maine’s School of Biology and Ecology researchers Ellie Groden and Frank Drummond have been working with Acadia National Park Biologists to evaluate the impacts and develop a strategy for managing the invasive European fire ant that has become a serious pest within the Park and other areas along the coast of Maine. Invasive species are second only to habitat destruction as a contributor to decline and elimination of native species and have become a priority for conservation efforts at the state, regional and national level. This project represents a multi-institutional collaboration coordinated by UMaine researchers, with USDA APHIS supporting surveys for detection of new infestations, the National Park Service supporting research on the ecology and management of this pest, the US EPA and USDA-CREES supporting additional research and outreach activities to educate the public about potential spread, and cooperation of Cooperative Extension specialists, Jim Dill and Lois Stack and Maine State Entomologist, Kathy Murray, to develop and present educational materials to stakeholders throughout the state.
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Managing Lake Ecosystems in an Era of Landscape Change - Linking Ecology with Social Science and Economics |
Maine has a large population of high quality lakes, many of which have remained remote from human influence. Recent trends in economic development and social patterns place these lakes at risk for damage from habitat alteration, nutrient enrichment, and exotic species introductions. Two EPA grants to the University of Maine will provide much needed research to help Maine make decisions on landuse planning to sustain the high quality of the State’s critical aquatic resources. The first grant funded Katherine Webster of the University of Maine’s School of Biology and Ecology and collaborators at Michigan State to build a team of ecologists and economists from both University and State Agencies to develop a national lake classification scheme. By accounting for ‘natural’ variation, lake water quality can be related to indices of human disturbance around the lake and in the watershed allowing managers to establish targets for restoration. This landscape-scale classification will be utilized in a second grant from EPA to the University of Maine, headed up by Kathleen Bell from Resource Economics and Policy, with co-investigators from the School of Forest Resources, the Mitchell Center, and Webster from Biology and Ecology. This research will track current and projected patterns of development and evaluate their potential effects on lake ecosystems. Such research comes at a time of critical need for guidance on sustainable development strategies at both the State and National levels.
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Wood Decay – Fungal Physiology and Its Role in Wood Biodegradation and Processing |
Jody Jellison of the School of Biology and Ecology and collaborators in Forestry and Engineering are examining the biological processes involved in bioconversion and biodegradation of lignocellulose. These processes have profound implications ranging from direct impacts on forest ecosystem processes and global carbon cycling to wood utilization and bioproducts development. Researchers are investigating the enzymatic and non-enzymatic fungal processes underlying the biodegradation of wood. This work is supported by the USDA competitive and special grants programs, the US Forest Service, and the recent NSF-EPSCoR Bioproducts initiative. This work has resulted in one patent and one patent pending. Studies include work with cellulose crystallinity, nanofiber production and basic physiological ecology. Anticipated outcomes include the development of environmentally appropriate wood protection methods, improved forest management practices, and the enhanced utilization of Maine’s forest resource.
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Guppies Offer Insights into Interface of Evolution and Ecology |
University of Maine’s School of Biology and Ecology researcher Michael Kinnison is bringing his considerable expertise in population and evolutionary biology to a five-year, million project aimed at defining the real-time relationships between evolution and ecology in the wild streams of Trinidad’s jungle. One of just three projects funded by the National Science Foundation's Frontiers in Integrative Biological Research program in 2006, this project brings together a multi-disciplinary team of researchers from across North America under the leadership of UC Riverside's David Reznick. Playing a key role in the overall project, Kinnison and his team will utilize the Maine portion of the grant to study month-to-month trait evolution in populations of a small stream fish, the Trinidadian guppy, using DNA and pedigree assignment approaches. Dr. Kinnison's lab is known for research into evolution that occurs in our own lifetimes, particularly in fishes in Maine and around the world. Experts in evolutionary biology, molecular biology, population ecology, community ecology, biogeochemistry, ecosystem science and applied math will work together on the project as they attempt to determine how ecology and evolution interact.
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Neuroscience at UMaine |
The integrative field of Neuroscience is experiencing explosive expansion and is one of the major growth areas in biology and behavior. It represents a modern synthetic approach to organization within biology, bringing together molecular and cellular biologists, biochemists, geneticists, physiologists, psychologists, mathematicians, educators, and clinicians. At UMaine an interdisciplinary neuroscience steering committee, representing over 20 faculty and interested parties, co-chaired by Harold Dowse of the School of Biology and Ecology and Alan Rosenwasser (Psychology), has been working to increase the visibility of this critical field and have set up an interdepartmental Neuroscience minor (housed in SBE). Studies in neuroscience span fields ranging from mathematics, through genetics, to behavior. Dowse is working on ion channels in the cardiac pacemaker cooperating with William Bray (Mathematics) to develop models of oscillating systems. The research of Jeffrey Hall (part-time SBE, full-time '08 and a world figure in neurogenetics) exemplifies vertical integration, working at the molecular, genetic, and behavioral levels. UMaine faculty (Dowse, Hall and Kass in SBE; Fremouw, Rosenwasser, Hayes and Cobo-Lewis in Psychology; Walker in Communication Disorders; Tu and Schillmoeller in COEHD) are working in collaboration with those in other institutions (Maine Medical Center, EMMC, UM) to address a number of scientific and clinical issues at the forefront of this field.
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Functional Genomics of Stress Tolerance in Higher Plants |
Gene regulation at the transcriptional level is an important aspect of the complex network of genes that define the intricate mechanisms involved in plant responses to the environment. Understanding how these networks function within the context of cellular biochemistry and physiology is an important goal of integrative plant biology. Benildo de los Reyes of the School of Biology and Ecology is the principal investigator of a research project supported by USDA-NRI-Plant Genome Program that aims to understand the molecular underpinnings of the cold stress response genetic regulatory networks (gene regulon) of warm-season plants using rice (Oryza sativa L.) as a model. He is currently using an integrated approach that includes genome-wide transcriptome (38,000 rice genes) and promoter architecture analyses, reverse genetics, biochemistry and physiology to assemble the hierarchical organization of the cold stress gene regulation. One of the current emphases is a pathway that involves reactive oxygen species (ROS) as the initial trigger linking the early branches of the network. This study is expected to establish the reference knowledge for comparative and functional genomic analysis of stress tolerance mechanisms among the syntenic group of grass species.
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Genome Sequence of Frog-Killing Fungus Released |
Researchers around the world now have a valuable new tool for studying the deadly Batrachochytrium dendrobatidis fungus, thanks to the efforts of scientists at the Broad Institute, Timothy James of Duke University and University of Maine’s researcher Joyce Longcore (SBE). The fungus' genome sequence was recently released to the public. Consisting of more than 20 million base pairs, the sequence offers scientists new insights into the genetic nature of the fungal pathogen. One of only a handful of researchers with expertise in identifying and culturing the unusual group of fungi collectively known as chytrids, Longcore provided the diploid strain of B. dendrobatidis that was recently sequenced by the Broad Institute's Fungal Genome Initiative team. James extracted the DNA from Longcore's cultures. The first chytrid to be sequenced, B. dendrobatidis has been implicated in amphibian declines around the world. Longcore was the first to isolate a pure culture of the pathogen nearly a decade ago. Her current research is focused on the relationships between chytrid species, and her lab on the University of Maine campus continues to serve as the world's leading repository for numerous strains of chytrid fungi.
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The School of Biology and Ecology is celebrating both our shared past and the exciting future with a big event on April 17, 2009. Activities include campus tours, an open house, a keynote presentation by Dr. George Jacobson, a reception, and dinner. This is an opportunity to “Look at Us Now”, meet our current students and faculty, as well as visit with some of our retired faculty. Most of the events are open to all (campus tours and the dinner need preregistration). See full schedule below...
Dr. Remy Rochette, of the University of New Brunswick, Saint John, appeared as part of the SBE Friday Seminar Series on December 5th, 2008. Recently tenured Dr. Rochette studies phenotypic evolution in marine invertebrates and spoke on recent research on the relationship between green crabs, Carcinus maenas, and intertidal snails, Littorina obtustata, in the Gulf of Maine and the Bay of Fundy.
Frank Drummond and Seanna Annis along with John Smagula in Horticultural Services, Dave Yarborough in Cooperative Extension, Andrew Files in the Department of Resource Economics and Policy have been developing an integrated management plan for organic production of lowbush blueberries for Maine growers in an Organic transitions grant from USDA-CREES. Field studies over multiple crop cycles have shown that changes in one production practice or ecological interaction in the lowbush blueberry ecosystem can result in numerous changes on the health of the plants, and their pests and pathogens. Increased available nitrogen levels in lowbush blueberry fields can produce decreases in yield due to increases in weed pressure and the incidence of the fungal disease, mummy berry blight. Insect pests damage and decrease the quality of lowbush blueberry fruit but also provide wounds for pathogens to enter plants and act as vectors for transferring disease inoculum between plants. Integrative research is necessary to develop organic management techniques as well as to sustain conventionally grown crops. The faculty also provides support to conventional growers to decrease off-farm inputs and maintain a sustainable production system.
Paleoecological studies expand the time scale over which ecological patterns and processes are investigated. Lake sediments serve as a repository for fossils that can be used to investigate environmental change over time scales ranging from hundreds to thousands of years. Jasmine Saros (Bio Sci and the Climate Change Institute) uses diatom fossils from the sediments of lakes to reconstruct trends in pH, nutrient loading, and climate change. She has received funding from the National Science Foundation to investigate the effects of enhanced atmospheric nitrogen deposition and climate change on working with the National Park Service alpine lake ecosystems. She recently began to assess critical nitrogen loads to aquatic ecosystems using paleoecological records. Current paleoecological research in Biological Sciences and Climate Change includes other studies of past aquatic and terrestrial environments. George Jacobson and Ann Dieffenbacher-Krall have recently completed a major NSF-funded study of the past 60,000 years of vegetation and climate in central Florida, and work in the lab now includes studies of paleoclimate in New Zealand and South America.
The School of Biology and Ecology has built a major multimedia center, the Bio New Media Laboratory, which creates sophisticated Web applications for both large and small courses. The facility works with a core faculty (Seth Tyler, Seanna Annis, Len Kass, Farahad Dastoor, and Mary Tyler of SBE), and together they have created a major on-line course management system, called Synapse, now in use in our large introductory courses and a number of upper-level courses (BIO 100, BIO 200, BIO 208, BIO 222, BIO 336, BIO 353, BIO 377/378, BIO 450, SMS 201), with additional courses outside of the department considering adoption. In addition to advancing education through multimedia, student interaction, and increasing ease of teaching courses with large enrollments, the platform is used to collect and analyze data for assessing learning outcomes. The facility was started by Mary Tyler, who has been developing multimedia educational material for developmental biology, cell biology, genetics, and behavior courses for a number of years. Her 9,000 grant from NSF-DUE enabled her to build and publish interactive CD-ROM-Web hybrids as well as DVDs and electronic lab manuals, as well as to develop the expertise in the lab through Ron Kozlowski, now Director of the Biology New Media Facility. In collaborations with other faculty, the facility has been advancing programs in education and serving research, for example: Michael Kinnison (SBE) on projects in ecology, Sara Lindsay (SMS) on a K-12 education project, Mary Rumpho (BMMB) on an educational project on evolution and gene transfer from plants to animals. Seth Tyler (SBE) on projects in data-base management and the evolution of lower metazoa, Chris Campbell (SBE) on a project to develop a Web database for the University of Maine’s and Josselyn Botanical Society’s Herbaria on plants and fungi, and with NSFA on developing a dynamic Web site for the College.
A key element in any curriculum in biology and ecology is first-hand experience in the field. This can be achieved through lab or work-experience, directed research, or other routes. Many of our biology students directly experience tropical ecosystems through a travel study course taught each March Break, INT 475: Field Studies in Ecology. Bill Glanz (SBE) has co-taught this course every year since 1998, with Mac Hunter (Wildlife Ecology) and Aram Calhoun (Plant, Soil & Environmental Science). The 2007 course to Panama will be the fourth visit to Central America; the course also has traveled to Peru three times and South Africa three times. In each course, 18 to 23 University of Maine students study examples of local ecosystems, be they tropical rainforests, mountain cloud forests, tropical savannas, or grasslands, and learn about key plant and animal species in each. Equally important, they review the human ecology of each region, focusing on land uses that are altering or degrading the natural landscapes of these tropical countries. Most students find this experience a valuable complement to their exposure to Maine’s ecosystems in our curriculum, and many are stimulated to consider graduate research or work experience in tropical countries.
Biology is the most popular major nationwide for students preparing for graduate study in the Health Professions, and the degrees in Biology and Zoology at UMaine includes all prerequisites for premedical, predental, preveterinary and other health-centered programs. In the School of Biology and Ecology, a majority of undergraduate students are interested in pursuing careers in the health professions, and a large percentage of them go on in health fields, including allopathic and osteopathic medicine, physicians assistants, physical therapy, veterinary medicine, chiropractic medicine, dentistry, pharmacy, optometry and ophthalmology. Our Biology and Zoology curriculum includes a number of health professions courses, which prepare the students for further study in these health fields by taking our courses such as BIO 100 Basic Biology, BIO 200 Biology of Organisms, BIO 208 Anatomy and Physiology, BIO 307 Introduction to neuroscience, BIO 325 Principles of Biotechnology, BIO 329 Vertebrate Biology, BIO 336 Developmental Biology, BIO 438 Morphogenesis and Differentiation, BIO 377 Animal Physiology, BIO 441 Biological Ultrastructure, BIOI 450 Histology, BIO 462 Genetics, BIO 474 Neurobiology, BIO 479 Endocrinology, BIO 480 Cell Biology, and various advanced courses in Genetics, Physiology, and Electron Microscopy.
Development of sustainable agricultural technologies is impossible without regarding cultivated fields as agricultural ecosystems—this integrative approach must be taken rather than thinking of agriculture as conglomerations of plants, insects, soils, and manufactured inputs. One of the foundations of organic farming is the assumption that the organic production systems create a generally unfavorable environment for pest populations. Entomologists and plant pathologists in the School of Biology and Ecology are investigating how soil properties and resulting potato plant health influence susceptibility to disease and insect pests. Collaborative research efforts involving entomologists Andrei Alyokhin, Frank Drummond, and Ellie Groden (SBE) and agronomist Greg Porter from the Department of Plant, Soil, and Environmental Sciences have shown a consistent reduction in the densities of Colorado potato beetle larvae and summer-generation adults on potatoes grown in manure-amended soils. The negative effects were broad in scope, including lower fecundity, higher mortality, slower development, and lower foliage consumption on manure-amended plots. Currently, Andrei Alyokhin is teaming up with molecular geneticist Benildo de los Reyes (SBE) to elucidate the mechanisms causing these phenomena. Stellos Tavantzis (SBE) and Robert Larkin from the USDA-ARS New England Plant, Soil and Water Laboratory have been studying the effectiveness of biological control organisms and compost amendments in managing soil-borne diseases of potato and improving crop yields in sustainable and organic production systems. Tavantzis has been working on the molecular and biochemical dissection of the phenomena of plant growth enhancement, genetically regulated attenuation, and compost-induced attenuation of virulence in the fungus causing Rhizoctonia disease of potato. This knowledge is being used to design novel, sustainable strategies for managing plant diseases and reducing the use of environment-polluting fungicides.
Maine has more lakes, miles of rivers and acres of wetlands than all of the remaining New England states combined. This wealth of aquatic resources has provided ecosystem services to Maine residents since prehistory, currently represents a cornerstone of the State’s economy, and figures heavily into aspects of future sustainable development. Expertise in aquatic ecology has grown dramatically at the University of Maine in the last five years, uniquely positioning the University to become a regional leader in aquatic research and education. For example, Kevin Simon’s research focuses on how the links between biological communities and biogeochemistry in streams are altered by human actions such as invasive species, agricultural landuse, and acid deposition. This research integrates techniques ranging from molecular biology to quantify microbial community structure to whole-stream additions of stable isotope tracers to track the cycling of energy and nutrients in streams. Looking toward the future, a team of aquatic ecologists is currently developing approaches for a landmark study in aquatic restoration based on planned dam removals on the Penobscot River. Many of these research goals have been, and will continue to be, met through external collaborations and campus interactions with entities like the Senator George Mitchell Center, the Climate Change Institute, the Department of Wildlife Ecology, the Department of Resource Economics and Policy, USGS, USDA-NRI, and Maine Agricultural and Forest Experiment Station.
Birds can be sentinels for environmental change. Rebecca Holberton’s work, funded by the National Science Foundation, Maine Agricultural and Forestry Experimental Station, and Maine’s Outdoor Heritage Fund, integrates behavior, physiology, and ecology to understand how wild birds cope with environmental conditions. Basic and applied research questions aim to unravel how birds meet challenges to their energy demand. While Holberton’s work focuses on the interaction between environmental factors (e.g., weather, food availability and habitat quality) and physiological constraints during the migratory period, she is interested in learning how success during each stage of the annual cycle can be influenced by activities during the other stages. The work has spanned from the polar regions to the tropics and includes a wide array of bird species such as songbirds, seabirds, and shorebirds in collaborations with the Smithsonian Migratory Bird Center, the U.S. Forest Service, U.S. Fish & Wildlife, and Maine Inland Fisheries & Wildlife. Much of the work has been done at the Penobscot Experimental Forest in Bradley, Maine. Broad scale bird movements are also monitored by portable surveillance radar to understand how migrants respond to the rapidly changing landscape (via cell towers, wind turbines, habitat loss) of the Gulf of Maine region.
The primary source for power that drives animal locomotion is muscle. Each step of muscle formation during early development translates to a progressive refinement of functional physiology. Clarissa Henry, of the Department of Biological sciences, utilizes the zebrafish as a model system for skeletal muscle development and function. She uses UMaine’s Zebrafish Facility as well as the Electron/Confocal Microscopy Facility to ferret out the molecular and morphogenetic networks that underlie muscle differentiation. She has recently begun to extend her work to other fish, such as Icefish from Antarctica. Because a large variety of diseases, such as the muscular dystrophies, affect muscle tissue in humans, Henry has also been collaborating with Maine institutions that focus on biomedical research such as the Jackson Laboratory and Maine Medical Research Institute. Henry has obtained funding from the Muscular Dystrophy Association and is working with a local MDA representative to increase public understanding of the muscular dystrophies. Thus, this organism-driven research focus allows Henry to integrate to “larger scale” questions (how does skeletal muscle develop in fish that live in frigid waters?) as well as focus on “smaller scale” questions (how do muscle fibers attach to tendons, which is critical to prevent muscular dystrophy?). Her work integrates fields in developmental biology, genetics, physiology, and ecology.
Identifying invasive plants and animals requires exacting criteria for distinguishing them from native species and gauging their potential for harming ecosystems. Worldwide shipping is introducing species into habitats where they have the potential to significantly alter native communities. Particularly problematic is accidental introduction of aquatic species through dumping of ballast water by ships. One such invasion recently identified is that by an acoel flatworm, which has spread into Maine waters from two probable shipping centers, Boston and Halifax, Nova Scotia. Seth Tyler of the School of Biology and Ecology, through support of a 0,000 National Science Foundation grant on systematics of the Acoela, has collaborated with ecologists Brian Rivest and James Coyer at Cornell and Anne Chapman at Dalhousie University to identify the invader as Convoluta convoluta, an acoel native to Europe. It first showed up in the vicinity of the two ports and appears to be spreading into the Gulf of Maine and south into Long Island Sound, typically occurring in such high numbers that, despite its small size (2--3 mm), it attracted the attention of divers by its abundance on kelp and urchin barrens. This worm bears symbiotic algae (zooxanthellae), and Tyler in collaborative work with molecular biologist Adam McCoy at Harvard University identified the symbiont through electron microscopical and molecular markers as the diatom Licmophora, as had been proposed for the European native worm. McCoy has since shown that this diatom is also invasive, and that its free-living form is invading the North American Atlantic coast in waves ahead of the acoel, providing the acoel with the resources to extend its own invasion.
University of Maine’s School of Biology and Ecology researchers Ellie Groden and Frank Drummond have been working with Acadia National Park Biologists to evaluate the impacts and develop a strategy for managing the invasive European fire ant that has become a serious pest within the Park and other areas along the coast of Maine. Invasive species are second only to habitat destruction as a contributor to decline and elimination of native species and have become a priority for conservation efforts at the state, regional and national level. This project represents a multi-institutional collaboration coordinated by UMaine researchers, with USDA APHIS supporting surveys for detection of new infestations, the National Park Service supporting research on the ecology and management of this pest, the US EPA and USDA-CREES supporting additional research and outreach activities to educate the public about potential spread, and cooperation of Cooperative Extension specialists, Jim Dill and Lois Stack and Maine State Entomologist, Kathy Murray, to develop and present educational materials to stakeholders throughout the state.
Maine has a large population of high quality lakes, many of which have remained remote from human influence. Recent trends in economic development and social patterns place these lakes at risk for damage from habitat alteration, nutrient enrichment, and exotic species introductions. Two EPA grants to the University of Maine will provide much needed research to help Maine make decisions on landuse planning to sustain the high quality of the State’s critical aquatic resources. The first grant funded Katherine Webster of the University of Maine’s School of Biology and Ecology and collaborators at Michigan State to build a team of ecologists and economists from both University and State Agencies to develop a national lake classification scheme. By accounting for ‘natural’ variation, lake water quality can be related to indices of human disturbance around the lake and in the watershed allowing managers to establish targets for restoration. This landscape-scale classification will be utilized in a second grant from EPA to the University of Maine, headed up by Kathleen Bell from Resource Economics and Policy, with co-investigators from the School of Forest Resources, the Mitchell Center, and Webster from Biology and Ecology. This research will track current and projected patterns of development and evaluate their potential effects on lake ecosystems. Such research comes at a time of critical need for guidance on sustainable development strategies at both the State and National levels.
Jody Jellison of the School of Biology and Ecology and collaborators in Forestry and Engineering are examining the biological processes involved in bioconversion and biodegradation of lignocellulose. These processes have profound implications ranging from direct impacts on forest ecosystem processes and global carbon cycling to wood utilization and bioproducts development. Researchers are investigating the enzymatic and non-enzymatic fungal processes underlying the biodegradation of wood. This work is supported by the USDA competitive and special grants programs, the US Forest Service, and the recent NSF-EPSCoR Bioproducts initiative. This work has resulted in one patent and one patent pending. Studies include work with cellulose crystallinity, nanofiber production and basic physiological ecology. Anticipated outcomes include the development of environmentally appropriate wood protection methods, improved forest management practices, and the enhanced utilization of Maine’s forest resource.
University of Maine’s School of Biology and Ecology researcher Michael Kinnison is bringing his considerable expertise in population and evolutionary biology to a five-year, million project aimed at defining the real-time relationships between evolution and ecology in the wild streams of Trinidad’s jungle. One of just three projects funded by the National Science Foundation's Frontiers in Integrative Biological Research program in 2006, this project brings together a multi-disciplinary team of researchers from across North America under the leadership of UC Riverside's David Reznick. Playing a key role in the overall project, Kinnison and his team will utilize the Maine portion of the grant to study month-to-month trait evolution in populations of a small stream fish, the Trinidadian guppy, using DNA and pedigree assignment approaches. Dr. Kinnison's lab is known for research into evolution that occurs in our own lifetimes, particularly in fishes in Maine and around the world. Experts in evolutionary biology, molecular biology, population ecology, community ecology, biogeochemistry, ecosystem science and applied math will work together on the project as they attempt to determine how ecology and evolution interact.
The integrative field of Neuroscience is experiencing explosive expansion and is one of the major growth areas in biology and behavior. It represents a modern synthetic approach to organization within biology, bringing together molecular and cellular biologists, biochemists, geneticists, physiologists, psychologists, mathematicians, educators, and clinicians. At UMaine an interdisciplinary neuroscience steering committee, representing over 20 faculty and interested parties, co-chaired by Harold Dowse of the School of Biology and Ecology and Alan Rosenwasser (Psychology), has been working to increase the visibility of this critical field and have set up an interdepartmental Neuroscience minor (housed in SBE). Studies in neuroscience span fields ranging from mathematics, through genetics, to behavior. Dowse is working on ion channels in the cardiac pacemaker cooperating with William Bray (Mathematics) to develop models of oscillating systems. The research of Jeffrey Hall (part-time SBE, full-time '08 and a world figure in neurogenetics) exemplifies vertical integration, working at the molecular, genetic, and behavioral levels. UMaine faculty (Dowse, Hall and Kass in SBE; Fremouw, Rosenwasser, Hayes and Cobo-Lewis in Psychology; Walker in Communication Disorders; Tu and Schillmoeller in COEHD) are working in collaboration with those in other institutions (Maine Medical Center, EMMC, UM) to address a number of scientific and clinical issues at the forefront of this field.
Gene regulation at the transcriptional level is an important aspect of the complex network of genes that define the intricate mechanisms involved in plant responses to the environment. Understanding how these networks function within the context of cellular biochemistry and physiology is an important goal of integrative plant biology. Benildo de los Reyes of the School of Biology and Ecology is the principal investigator of a research project supported by USDA-NRI-Plant Genome Program that aims to understand the molecular underpinnings of the cold stress response genetic regulatory networks (gene regulon) of warm-season plants using rice (Oryza sativa L.) as a model. He is currently using an integrated approach that includes genome-wide transcriptome (38,000 rice genes) and promoter architecture analyses, reverse genetics, biochemistry and physiology to assemble the hierarchical organization of the cold stress gene regulation. One of the current emphases is a pathway that involves reactive oxygen species (ROS) as the initial trigger linking the early branches of the network. This study is expected to establish the reference knowledge for comparative and functional genomic analysis of stress tolerance mechanisms among the syntenic group of grass species.
Researchers around the world now have a valuable new tool for studying the deadly Batrachochytrium dendrobatidis fungus, thanks to the efforts of scientists at the Broad Institute, Timothy James of Duke University and University of Maine’s researcher Joyce Longcore (SBE). The fungus' genome sequence was recently released to the public. Consisting of more than 20 million base pairs, the sequence offers scientists new insights into the genetic nature of the fungal pathogen. One of only a handful of researchers with expertise in identifying and culturing the unusual group of fungi collectively known as chytrids, Longcore provided the diploid strain of B. dendrobatidis that was recently sequenced by the Broad Institute's Fungal Genome Initiative team. James extracted the DNA from Longcore's cultures. The first chytrid to be sequenced, B. dendrobatidis has been implicated in amphibian declines around the world. Longcore was the first to isolate a pure culture of the pathogen nearly a decade ago. Her current research is focused on the relationships between chytrid species, and her lab on the University of Maine campus continues to serve as the world's leading repository for numerous strains of chytrid fungi.
